Well, as theistic evolution is nothing more than assuming evolution has a god who makes it happen (and may also guide it to some degree) instead of blind chance, then most of the same scientific arguments against evolution would also apply to theistic evolution. Problem is that since you cannot prove or disprove a theory that is not testable, it really boils down to opinion on belief in evolution (theistic or otherwise).
One can say, radiometric dating shows this rock to be a million years old, but that is an estimate based on a number of assumptions that may or may not be valid. So one can say that we really don't know how old that rock is. Or one can say, look at the layers in this rock formation, they must have taken billions of years to form, but we know layers are laid down in a short time by flood waters, so again, nothing is proved. But these are not so much arguments for evolution as arguments for long ages. However, they then take the fossils from these rock layers and claim they are as old as the rocks and since the water also sorts the critters, they then perceive an evolutionary sequence. Or they take a process such as natural selection and claim it is evidence for evolution, when really it is just variation within a kind and limited by the existing genetic material, not generating new genetic information.
But the best evidence against evolution of the atheistic type is that it is impossible to form the complexities of our human bodies and minds by a series of chance events that began with some chemicals in a puddle. Throw a god into the mix and I guess in theory a god can do anything so could make this evolutionary sequence, helping it along at certain points by creating new features to advance a creature to the next stage. But then if such God gave us the Ten Commandments, he certainly would have given us a different message in Genesis 1 and 2 than a 6-day creation. Surely if a god produced the world by evolution, then his bible would start much like Carl Sagan, "Billions and billions of years ago..."